I somehow removed the QueryPort through all the changes with the command line args. It's back now. Also added default blank values for EnumValues to avoid any possible issues.
Updated the command line args due to formatting issues with the game, added Server Password to the command line since it goes in the Engine.ini and is not a line included by default. Disabled RCON for now due to the bug with AMP disconnecting after some time. The server works fine with regular console but will not accept input.
James Manker